Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trim13Q9CYB0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim13Q9CYB0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Gm14859-201ENSMUST00000117752 357 ntBASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Gm8655-201ENSMUST00000221159 852 ntBASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim13Q9CYB0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Gm27867-201ENSMUST00000184778 125 ntBASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim13Q9CYB0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim13Q9CYB0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms