Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gm5682-201ENSMUST00000173402 505 ntBASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.55□□□□□ -0.08
Ssu72Q9CY97 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssu72Q9CY97 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Gm13836-201ENSMUST00000121159 501 ntBASIC14.54□□□□□ -0.08
Ssu72Q9CY97 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Olfr286-202ENSMUST00000205305 969 ntBASIC14.54□□□□□ -0.08
Ssu72Q9CY97 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ssu72Q9CY97 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.53□□□□□ -0.08
Ssu72Q9CY97 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssu72Q9CY97 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms