Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Gm18624-201ENSMUST00000220966 658 ntBASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nip7Q9CXK8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nip7Q9CXK8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nip7Q9CXK8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nip7Q9CXK8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nip7Q9CXK8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nip7Q9CXK8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Gm33320-201ENSMUST00000192232 530 ntBASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms