Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Gm14057-201ENSMUST00000120631 482 ntBASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm7Q9CQQ8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gm25144-201ENSMUST00000179561 110 ntBASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gm25352-201ENSMUST00000179815 110 ntBASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gm18766-201ENSMUST00000189811 808 ntBASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm7Q9CQQ8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lsm7Q9CQQ8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Gm17837-201ENSMUST00000186435 985 ntBASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.77□□□□□ -0.05
Lsm7Q9CQQ8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms