Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gm11539-201ENSMUST00000119837 557 ntBASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chchd1Q9CQA6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms