Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm5970-201ENSMUST00000131638 1216 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Rtn4Q99P72 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.86■□□□□ 0.61
Rtn4Q99P72 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Gm11745-201ENSMUST00000121669 448 ntBASIC18.86■□□□□ 0.61
Rtn4Q99P72 Mir1895-201ENSMUST00000122615 79 ntBASIC18.86■□□□□ 0.61
Rtn4Q99P72 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Gm19189-201ENSMUST00000221689 754 ntBASIC18.86■□□□□ 0.61
Rtn4Q99P72 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.86■□□□□ 0.61
Rtn4Q99P72 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn4Q99P72 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm9385-201ENSMUST00000117563 472 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm29011-201ENSMUST00000191059 712 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm44335-201ENSMUST00000196879 141 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm44297-201ENSMUST00000198304 141 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm44346-201ENSMUST00000198851 141 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gm7439-201ENSMUST00000214053 835 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.85■□□□□ 0.61
Rtn4Q99P72 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn4Q99P72 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Gm11025-201ENSMUST00000140773 466 ntBASIC18.84■□□□□ 0.61
Rtn4Q99P72 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn4Q99P72 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms