Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.3□□□□□ -0.12
Msh4Q99MT2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Gm6736-201ENSMUST00000166583 948 ntBASIC14.3□□□□□ -0.12
Msh4Q99MT2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.3□□□□□ -0.12
Msh4Q99MT2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Msh4Q99MT2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh4Q99MT2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.28□□□□□ -0.12
Msh4Q99MT2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Gm45747-201ENSMUST00000212203 999 ntBASIC14.28□□□□□ -0.12
Msh4Q99MT2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.28□□□□□ -0.12
Msh4Q99MT2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh4Q99MT2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh4Q99MT2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.27□□□□□ -0.12
Msh4Q99MT2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Msh4Q99MT2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.27□□□□□ -0.12
Msh4Q99MT2 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.27□□□□□ -0.12
Msh4Q99MT2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms