Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkd1Q99MH6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Gm15173-201ENSMUST00000122049 433 ntBASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkd1Q99MH6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Gm5682-201ENSMUST00000173402 505 ntBASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Birc2-201ENSMUST00000054878 378 ntBASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkd1Q99MH6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkd1Q99MH6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms