Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gm27741-201ENSMUST00000185060 237 ntBASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Cstf3Q99LI7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.17□□□□□ -0.14
Cstf3Q99LI7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf3Q99LI7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Gm12350-201ENSMUST00000121208 462 ntBASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms