Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Gm45668-201ENSMUST00000211271 493 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cstf1Q99LC2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gm11918-201ENSMUST00000121660 179 ntBASIC14.63□□□□□ -0.07
Cstf1Q99LC2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gm43630-201ENSMUST00000201550 776 ntBASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cstf1Q99LC2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Gm9522-201ENSMUST00000182394 926 ntBASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms