Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Gm5867-201ENSMUST00000063197 592 ntBASIC13.37□□□□□ -0.27
Lims1Q99JW4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lims1Q99JW4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lims1Q99JW4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Gm14042-201ENSMUST00000120139 833 ntBASIC13.36□□□□□ -0.27
Lims1Q99JW4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.36□□□□□ -0.27
Lims1Q99JW4 Gm18733-201ENSMUST00000173950 856 ntBASIC13.36□□□□□ -0.27
Lims1Q99JW4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lims1Q99JW4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Gm5864-201ENSMUST00000202263 970 ntBASIC13.35□□□□□ -0.27
Lims1Q99JW4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 AV026068-213ENSMUST00000223675 1171 ntBASIC13.35□□□□□ -0.27
Lims1Q99JW4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.35□□□□□ -0.27
Lims1Q99JW4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lims1Q99JW4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms