Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gm22189-201ENSMUST00000103822 86 ntBASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gm13464-201ENSMUST00000119418 935 ntBASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gm9522-201ENSMUST00000182394 926 ntBASIC16.85■□□□□ 0.29
Rfc4Q99J62 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.85■□□□□ 0.29
Rfc4Q99J62 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc4Q99J62 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Gm6912-201ENSMUST00000117218 544 ntBASIC16.84■□□□□ 0.29
Rfc4Q99J62 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Gm9908-201ENSMUST00000211534 448 ntBASIC16.84■□□□□ 0.29
Rfc4Q99J62 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.84■□□□□ 0.29
Rfc4Q99J62 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Gm25857-201ENSMUST00000082788 129 ntBASIC16.84■□□□□ 0.29
Rfc4Q99J62 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.84■□□□□ 0.29
Rfc4Q99J62 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfc4Q99J62 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rfc4Q99J62 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfc4Q99J62 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Rfc4Q99J62 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rfc4Q99J62 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfc4Q99J62 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm12138-201ENSMUST00000122180 951 ntBASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm45453-201ENSMUST00000211758 853 ntBASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.83■□□□□ 0.28
Rfc4Q99J62 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm9229-201ENSMUST00000222777 126 ntBASIC16.83■□□□□ 0.28
Rfc4Q99J62 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Gm15823-201ENSMUST00000064305 670 ntBASIC16.83■□□□□ 0.28
Rfc4Q99J62 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms