Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.27■□□□□ 0.36
Col20a1Q923P0 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.27■□□□□ 0.36
Col20a1Q923P0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Col20a1Q923P0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col20a1Q923P0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col20a1Q923P0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col20a1Q923P0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Col20a1Q923P0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Mir1897-201ENSMUST00000122581 272 ntBASIC17.26■□□□□ 0.35
Col20a1Q923P0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.26■□□□□ 0.35
Col20a1Q923P0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.26■□□□□ 0.35
Col20a1Q923P0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col20a1Q923P0 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.26■□□□□ 0.35
Col20a1Q923P0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Gm14719-201ENSMUST00000121891 340 ntBASIC17.25■□□□□ 0.35
Col20a1Q923P0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col20a1Q923P0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 Gm15487-201ENSMUST00000122373 465 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Gm10275-202ENSMUST00000168697 495 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Gm27838-201ENSMUST00000184829 128 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 AA619741-201ENSMUST00000195095 646 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Gm10275-201ENSMUST00000092620 635 ntBASIC17.24■□□□□ 0.35
Col20a1Q923P0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms