Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm13453-201ENSMUST00000118708 357 ntBASIC16.95■□□□□ 0.3
Smc1bQ920F6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.95■□□□□ 0.3
Smc1bQ920F6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Grk6-207ENSMUST00000225925 2769 ntBASIC16.94■□□□□ 0.3
Smc1bQ920F6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smc1bQ920F6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.93■□□□□ 0.3
Smc1bQ920F6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.93■□□□□ 0.3
Smc1bQ920F6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.93■□□□□ 0.3
Smc1bQ920F6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smc1bQ920F6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.92■□□□□ 0.3
Smc1bQ920F6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Gm6973-201ENSMUST00000117080 721 ntBASIC16.92■□□□□ 0.3
Smc1bQ920F6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.92■□□□□ 0.3
Smc1bQ920F6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smc1bQ920F6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc1bQ920F6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms