Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Syt7-204ENSMUST00000223586 1344 ntBASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga6Q91XY2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Gm18049-201ENSMUST00000208909 581 ntBASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Grk6-207ENSMUST00000225925 2769 ntBASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Asic1-205ENSMUST00000228185 1818 ntBASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga6Q91XY2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Gm15653-201ENSMUST00000119247 907 ntBASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga6Q91XY2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms