Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.49□□□□□ -0.09
Vsx1Q91V10 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.49□□□□□ -0.09
Vsx1Q91V10 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.49□□□□□ -0.09
Vsx1Q91V10 Gm20445-201ENSMUST00000061905 565 ntBASIC14.49□□□□□ -0.09
Vsx1Q91V10 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gm5566-201ENSMUST00000116118 459 ntBASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gm43703-201ENSMUST00000200523 763 ntBASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Gm45668-201ENSMUST00000211271 493 ntBASIC14.48□□□□□ -0.09
Vsx1Q91V10 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vsx1Q91V10 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.47□□□□□ -0.09
Vsx1Q91V10 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.47□□□□□ -0.09
Vsx1Q91V10 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vsx1Q91V10 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vsx1Q91V10 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vsx1Q91V10 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms