Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Gm15590-201ENSMUST00000078419 552 ntBASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm1Q8VC85 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
Lsm1Q8VC85 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Gm27628-201ENSMUST00000184911 107 ntBASIC14.06□□□□□ -0.16
Lsm1Q8VC85 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm1Q8VC85 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Gm13597-201ENSMUST00000121239 375 ntBASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms