Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpap2Q8VC34 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpap2Q8VC34 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.08■□□□□ 0.17
Rpap2Q8VC34 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Gm37230-201ENSMUST00000194491 818 ntBASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpap2Q8VC34 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Mir1895-201ENSMUST00000122615 79 ntBASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Rprl2-201ENSMUST00000157150 290 ntBASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpap2Q8VC34 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.06■□□□□ 0.16
Rpap2Q8VC34 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.06■□□□□ 0.16
Rpap2Q8VC34 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpap2Q8VC34 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gm11745-201ENSMUST00000121669 448 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms