Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.7□□□□□ -0.06
Vps39Q8R5L3 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.69□□□□□ -0.06
Vps39Q8R5L3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps39Q8R5L3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Gm27300-201ENSMUST00000184085 97 ntBASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Gm27335-201ENSMUST00000184758 97 ntBASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Gm27628-201ENSMUST00000184911 107 ntBASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Gm2272-201ENSMUST00000194903 582 ntBASIC14.68□□□□□ -0.06
Vps39Q8R5L3 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps39Q8R5L3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms