Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Gm10252-201ENSMUST00000209541 832 ntBASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.97□□□□□ -0.49
Nup35Q8R4R6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup35Q8R4R6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup35Q8R4R6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms