Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.84□□□□□ -0.19
Clrn1Q8K445 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.84□□□□□ -0.19
Clrn1Q8K445 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.84□□□□□ -0.19
Clrn1Q8K445 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clrn1Q8K445 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clrn1Q8K445 Carlr-201ENSMUST00000181515 2574 ntBASIC13.83□□□□□ -0.19
Clrn1Q8K445 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clrn1Q8K445 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Gm15427-201ENSMUST00000117288 531 ntBASIC13.83□□□□□ -0.2
Clrn1Q8K445 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.83□□□□□ -0.2
Clrn1Q8K445 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.83□□□□□ -0.2
Clrn1Q8K445 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clrn1Q8K445 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.82□□□□□ -0.2
Clrn1Q8K445 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.82□□□□□ -0.2
Clrn1Q8K445 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.82□□□□□ -0.2
Clrn1Q8K445 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clrn1Q8K445 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn1Q8K445 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.81□□□□□ -0.2
Clrn1Q8K445 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms