Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cchcr1Q8K2I2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cchcr1Q8K2I2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cchcr1Q8K2I2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cchcr1Q8K2I2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.33■□□□□ 0.37
Cchcr1Q8K2I2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cchcr1Q8K2I2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Gm12350-201ENSMUST00000121208 462 ntBASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cchcr1Q8K2I2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Gm16026-204ENSMUST00000162652 683 ntBASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms