Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm4995-201ENSMUST00000117247 432 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm9385-201ENSMUST00000117563 472 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm11594-201ENSMUST00000122313 162 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm5867-201ENSMUST00000063197 592 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfwd3Q8CIK8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Rpph1-201ENSMUST00000175096 319 ntBASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfwd3Q8CIK8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfwd3Q8CIK8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.77□□□□□ -0.2
Rfwd3Q8CIK8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfwd3Q8CIK8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rfwd3Q8CIK8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rfwd3Q8CIK8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rfwd3Q8CIK8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.77□□□□□ -0.2
Rfwd3Q8CIK8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms