Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
ShfQ8CG80 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.09□□□□□ -0.31
ShfQ8CG80 Gm2451-201ENSMUST00000199447 999 ntBASIC13.09□□□□□ -0.31
ShfQ8CG80 Gm10290-201ENSMUST00000200451 999 ntBASIC13.09□□□□□ -0.31
ShfQ8CG80 Olfr286-202ENSMUST00000205305 969 ntBASIC13.09□□□□□ -0.31
ShfQ8CG80 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.09□□□□□ -0.31
ShfQ8CG80 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShfQ8CG80 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShfQ8CG80 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShfQ8CG80 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShfQ8CG80 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.08□□□□□ -0.31
ShfQ8CG80 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
ShfQ8CG80 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShfQ8CG80 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShfQ8CG80 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.08□□□□□ -0.32
ShfQ8CG80 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.08□□□□□ -0.32
ShfQ8CG80 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
ShfQ8CG80 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
ShfQ8CG80 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShfQ8CG80 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.07□□□□□ -0.32
ShfQ8CG80 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ShfQ8CG80 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Gm7153-201ENSMUST00000117092 455 ntBASIC13.07□□□□□ -0.32
ShfQ8CG80 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ShfQ8CG80 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.07□□□□□ -0.32
ShfQ8CG80 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Gm2272-201ENSMUST00000194903 582 ntBASIC13.07□□□□□ -0.32
ShfQ8CG80 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.07□□□□□ -0.32
ShfQ8CG80 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShfQ8CG80 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.06□□□□□ -0.32
ShfQ8CG80 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.06□□□□□ -0.32
ShfQ8CG80 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ShfQ8CG80 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.06□□□□□ -0.32
ShfQ8CG80 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShfQ8CG80 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.06□□□□□ -0.32
ShfQ8CG80 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.06□□□□□ -0.32
ShfQ8CG80 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms