Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Gm9719-201ENSMUST00000162765 543 ntBASIC18.05■□□□□ 0.48
Smc4Q8CG47 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Gm6888-201ENSMUST00000221983 706 ntBASIC18.04■□□□□ 0.48
Smc4Q8CG47 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc4Q8CG47 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Gm13223-201ENSMUST00000118609 747 ntBASIC18.03■□□□□ 0.48
Smc4Q8CG47 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Gm27306-201ENSMUST00000183970 107 ntBASIC18.03■□□□□ 0.48
Smc4Q8CG47 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.03■□□□□ 0.48
Smc4Q8CG47 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc4Q8CG47 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Gm14767-201ENSMUST00000121559 586 ntBASIC18.02■□□□□ 0.48
Smc4Q8CG47 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Gm37230-201ENSMUST00000194491 818 ntBASIC18.02■□□□□ 0.48
Smc4Q8CG47 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc4Q8CG47 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc4Q8CG47 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smc4Q8CG47 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc4Q8CG47 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc4Q8CG47 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc4Q8CG47 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc4Q8CG47 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms