Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc38Q8CDN8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Gm9726-201ENSMUST00000180321 678 ntBASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc38Q8CDN8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms