Protein–RNA interactions for Protein: Q8CBD1

Nrip1, Nuclear receptor-interacting protein 1, mousemouse

Predictions only

Length 1,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip1Q8CBD1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Mir1938-201ENSMUST00000158746 100 ntBASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Gm19220-201ENSMUST00000222682 803 ntBASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nrip1Q8CBD1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Gm8749-201ENSMUST00000117737 331 ntBASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nrip1Q8CBD1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nrip1Q8CBD1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Gm9002-201ENSMUST00000178437 499 ntBASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Gm37230-201ENSMUST00000194491 818 ntBASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Gm43630-201ENSMUST00000201550 776 ntBASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nrip1Q8CBD1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm9182-201ENSMUST00000217829 639 ntBASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nrip1Q8CBD1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms