Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Gm14494-201ENSMUST00000118786 435 ntBASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf3Q8C120 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gm4995-201ENSMUST00000117247 432 ntBASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gm16026-204ENSMUST00000162652 683 ntBASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gm6443-201ENSMUST00000203599 874 ntBASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf3Q8C120 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf3Q8C120 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms