Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Shd-206ENSMUST00000225145 998 ntBASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf2Q8BZT2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf2Q8BZT2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf2Q8BZT2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Sh3rf2Q8BZT2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf2Q8BZT2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Gm6222-201ENSMUST00000120787 396 ntBASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Gm7775-201ENSMUST00000218871 853 ntBASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh3rf2Q8BZT2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms