Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup54Q8BTS4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup54Q8BTS4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup54Q8BTS4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nup54Q8BTS4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup54Q8BTS4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nup54Q8BTS4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Gm37728-201ENSMUST00000195025 2292 ntBASIC15□□□□□ -0.01
Nup54Q8BTS4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15□□□□□ -0.01
Nup54Q8BTS4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Gm7774-201ENSMUST00000200064 533 ntBASIC15□□□□□ -0.01
Nup54Q8BTS4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup54Q8BTS4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15□□□□□ -0.01
Nup54Q8BTS4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Gm25948-201ENSMUST00000175334 112 ntBASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Gm5779-201ENSMUST00000218467 910 ntBASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup54Q8BTS4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Gm29541-201ENSMUST00000191351 678 ntBASIC14.98□□□□□ -0.01
Nup54Q8BTS4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms