Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.11■□□□□ 0.01
Suds3Q8BR65 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Gm37935-201ENSMUST00000192012 982 ntBASIC15.11■□□□□ 0.01
Suds3Q8BR65 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.11■□□□□ 0.01
Suds3Q8BR65 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.11■□□□□ 0.01
Suds3Q8BR65 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Gm11764-201ENSMUST00000120221 623 ntBASIC15.1■□□□□ 0.01
Suds3Q8BR65 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.1■□□□□ 0.01
Suds3Q8BR65 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.1■□□□□ 0.01
Suds3Q8BR65 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.1■□□□□ 0.01
Suds3Q8BR65 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.1■□□□□ 0.01
Suds3Q8BR65 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Suds3Q8BR65 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gm27300-201ENSMUST00000184085 97 ntBASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gm27335-201ENSMUST00000184758 97 ntBASIC15.09■□□□□ 0.01
Suds3Q8BR65 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.09■□□□□ 0.01
Suds3Q8BR65 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.09■□□□□ 0.01
Suds3Q8BR65 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.09■□□□□ 0.01
Suds3Q8BR65 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.09■□□□□ 0.01
Suds3Q8BR65 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Suds3Q8BR65 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Suds3Q8BR65 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Suds3Q8BR65 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.08■□□□□ 0
Suds3Q8BR65 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.08■□□□□ 0
Suds3Q8BR65 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.08■□□□□ 0
Suds3Q8BR65 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.08■□□□□ 0
Suds3Q8BR65 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Gm14822-201ENSMUST00000122247 291 ntBASIC15.08■□□□□ 0
Suds3Q8BR65 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.08■□□□□ 0
Suds3Q8BR65 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms