Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco3Q8BQM7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Smco3Q8BQM7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Smco3Q8BQM7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smco3Q8BQM7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco3Q8BQM7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms