Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Gm18489-201ENSMUST00000172565 551 ntBASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Gm7787-201ENSMUST00000216858 688 ntBASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm12008-201ENSMUST00000117791 755 ntBASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm6550-201ENSMUST00000187574 993 ntBASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm10060-201ENSMUST00000212002 111 ntBASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ckap4Q8BMK4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ckap4Q8BMK4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ckap4Q8BMK4 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.9□□□□□ -0.19
Ckap4Q8BMK4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ckap4Q8BMK4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ckap4Q8BMK4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms