Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Gm14494-201ENSMUST00000118786 435 ntBASIC17.22■□□□□ 0.35
Samm50Q8BGH2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Gm2213-201ENSMUST00000197485 688 ntBASIC17.22■□□□□ 0.35
Samm50Q8BGH2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Samm50Q8BGH2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.21■□□□□ 0.35
Samm50Q8BGH2 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Samm50Q8BGH2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Samm50Q8BGH2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Samm50Q8BGH2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Samm50Q8BGH2 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms