Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox21Q811W0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox21Q811W0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sox21Q811W0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox21Q811W0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sox21Q811W0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox21Q811W0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Gm38294-201ENSMUST00000192831 381 ntBASIC12.01□□□□□ -0.49
Sox21Q811W0 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.01□□□□□ -0.49
Sox21Q811W0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox21Q811W0 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.01□□□□□ -0.49
Sox21Q811W0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox21Q811W0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox21Q811W0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox21Q811W0 BC037039-201ENSMUST00000192003 2205 ntBASIC12.01□□□□□ -0.49
Sox21Q811W0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox21Q811W0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox21Q811W0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox21Q811W0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12□□□□□ -0.49
Sox21Q811W0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12□□□□□ -0.49
Sox21Q811W0 CT009510.1-201ENSMUST00000227972 270 ntBASIC12□□□□□ -0.49
Sox21Q811W0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12□□□□□ -0.49
Sox21Q811W0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12□□□□□ -0.49
Sox21Q811W0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Gm13127-201ENSMUST00000118978 1389 ntBASIC12□□□□□ -0.49
Sox21Q811W0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12□□□□□ -0.49
Sox21Q811W0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12□□□□□ -0.49
Sox21Q811W0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox21Q811W0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms