Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Gm23984-201ENSMUST00000157139 203 ntBASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Gm18187-201ENSMUST00000196476 984 ntBASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp6nlQ80XC3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp6nlQ80XC3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Gm21854-201ENSMUST00000179901 471 ntBASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Gm8515-201ENSMUST00000194852 576 ntBASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp6nlQ80XC3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Gm45668-201ENSMUST00000211271 493 ntBASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp6nlQ80XC3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.12■□□□□ 0.17
Usp6nlQ80XC3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms