Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Gm15429-201ENSMUST00000151268 798 ntBASIC18.47■□□□□ 0.55
Slit1Q80TR4 Gm45784-201ENSMUST00000188360 142 ntBASIC18.47■□□□□ 0.55
Slit1Q80TR4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slit1Q80TR4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.46■□□□□ 0.55
Slit1Q80TR4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.46■□□□□ 0.55
Slit1Q80TR4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.46■□□□□ 0.55
Slit1Q80TR4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slit1Q80TR4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Gm11814-201ENSMUST00000119515 929 ntBASIC18.45■□□□□ 0.54
Slit1Q80TR4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Gm43094-201ENSMUST00000196549 921 ntBASIC18.45■□□□□ 0.54
Slit1Q80TR4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Gm18027-201ENSMUST00000218947 619 ntBASIC18.45■□□□□ 0.54
Slit1Q80TR4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slit1Q80TR4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.44■□□□□ 0.54
Slit1Q80TR4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slit1Q80TR4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms