Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh19Q80TF3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh19Q80TF3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Gm13015-201ENSMUST00000118674 204 ntBASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms