Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Gm8463-201ENSMUST00000208573 613 ntBASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 AC155729.1-201ENSMUST00000227758 544 ntBASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Rpap1Q80TE0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
Rpap1Q80TE0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rpap1Q80TE0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Gm45841-201ENSMUST00000207700 164 ntBASIC22.44■■□□□ 1.18
Rpap1Q80TE0 AC110817.1-201ENSMUST00000225706 605 ntBASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpap1Q80TE0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rpap1Q80TE0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms