Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.23■□□□□ 0.03
Cspg5Q71M36 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.23■□□□□ 0.03
Cspg5Q71M36 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg5Q71M36 BC037039-201ENSMUST00000192003 2205 ntBASIC15.23■□□□□ 0.03
Cspg5Q71M36 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.22■□□□□ 0.03
Cspg5Q71M36 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.22■□□□□ 0.03
Cspg5Q71M36 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Gm27989-201ENSMUST00000184721 107 ntBASIC15.22■□□□□ 0.03
Cspg5Q71M36 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg5Q71M36 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Gm6888-201ENSMUST00000221983 706 ntBASIC15.21■□□□□ 0.03
Cspg5Q71M36 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.21■□□□□ 0.03
Cspg5Q71M36 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cspg5Q71M36 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cspg5Q71M36 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cspg5Q71M36 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg5Q71M36 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg5Q71M36 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.2■□□□□ 0.02
Cspg5Q71M36 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.2■□□□□ 0.02
Cspg5Q71M36 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.2■□□□□ 0.02
Cspg5Q71M36 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms