Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd1Q6PIP5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd1Q6PIP5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd1Q6PIP5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd1Q6PIP5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm6415-201ENSMUST00000118488 348 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm13015-201ENSMUST00000118674 204 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm25144-201ENSMUST00000179561 110 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm25352-201ENSMUST00000179815 110 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm27622-201ENSMUST00000183779 60 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm29541-201ENSMUST00000191351 678 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nudcd1Q6PIP5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nudcd1Q6PIP5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd1Q6PIP5 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.76□□□□□ -0.05
Nudcd1Q6PIP5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd1Q6PIP5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Nudcd1Q6PIP5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms