Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.44■□□□□ 0.22
Abcf1Q6P542 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.44■□□□□ 0.22
Abcf1Q6P542 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.44■□□□□ 0.22
Abcf1Q6P542 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcf1Q6P542 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abcf1Q6P542 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Gm1401-201ENSMUST00000122048 772 ntBASIC16.42■□□□□ 0.22
Abcf1Q6P542 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Abcf1Q6P542 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms