Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.21□□□□□ -0.13
Cpsf6Q6NVF9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Cpsf6Q6NVF9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf6Q6NVF9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms