Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Gm16026-204ENSMUST00000162652 683 ntBASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Gm45747-201ENSMUST00000212203 999 ntBASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sp140Q6NSQ5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Gm9385-201ENSMUST00000117563 472 ntBASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sp140Q6NSQ5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm1401-201ENSMUST00000122048 772 ntBASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm27301-201ENSMUST00000184012 127 ntBASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm2451-201ENSMUST00000199447 999 ntBASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm10290-201ENSMUST00000200451 999 ntBASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm5364-201ENSMUST00000216789 889 ntBASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms