Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gm13418-201ENSMUST00000119097 944 ntBASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gm37153-201ENSMUST00000193637 231 ntBASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gm7787-201ENSMUST00000216858 688 ntBASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.42■□□□□ 0.22
Tpm4Q6IRU2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm4Q6IRU2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Gm43347-201ENSMUST00000200226 580 ntBASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm4Q6IRU2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tpm4Q6IRU2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Gm7222-201ENSMUST00000117512 906 ntBASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm4Q6IRU2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm4Q6IRU2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms