Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Carlr-201ENSMUST00000181515 2574 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.21■□□□□ 0.34
Krt40Q6IFX3 BC001981-202ENSMUST00000191393 1545 ntBASIC17.21■□□□□ 0.34
Krt40Q6IFX3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Krt40Q6IFX3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Gm14719-201ENSMUST00000121891 340 ntBASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt40Q6IFX3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Gm43703-201ENSMUST00000200523 763 ntBASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt40Q6IFX3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.18■□□□□ 0.34
Krt40Q6IFX3 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Mir125a-201ENSMUST00000083545 68 ntBASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt40Q6IFX3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Krt40Q6IFX3 Gm27838-201ENSMUST00000184829 128 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms