Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Gm11452-201ENSMUST00000122376 690 ntBASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga7Q6DD96 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Gm10060-201ENSMUST00000212002 111 ntBASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 AV026068-213ENSMUST00000223675 1171 ntBASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga7Q6DD96 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.25□□□□□ -0.13
Pcdhga7Q6DD96 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms