Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VclQ64727 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VclQ64727 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VclQ64727 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VclQ64727 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.41□□□□□ -0.1
VclQ64727 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Gm14701-201ENSMUST00000117156 348 ntBASIC14.41□□□□□ -0.1
VclQ64727 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.41□□□□□ -0.1
VclQ64727 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Mir6990-201ENSMUST00000183724 91 ntBASIC14.41□□□□□ -0.1
VclQ64727 Gm44335-201ENSMUST00000196879 141 ntBASIC14.41□□□□□ -0.1
VclQ64727 Gm44297-201ENSMUST00000198304 141 ntBASIC14.41□□□□□ -0.1
VclQ64727 Gm44346-201ENSMUST00000198851 141 ntBASIC14.41□□□□□ -0.1
VclQ64727 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.41□□□□□ -0.1
VclQ64727 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VclQ64727 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
VclQ64727 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VclQ64727 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VclQ64727 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VclQ64727 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VclQ64727 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VclQ64727 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VclQ64727 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.4□□□□□ -0.1
VclQ64727 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.4□□□□□ -0.1
VclQ64727 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VclQ64727 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
VclQ64727 Gm8396-201ENSMUST00000057361 823 ntBASIC14.4□□□□□ -0.1
VclQ64727 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
VclQ64727 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VclQ64727 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.4□□□□□ -0.1
VclQ64727 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VclQ64727 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.39□□□□□ -0.11
VclQ64727 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
VclQ64727 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.39□□□□□ -0.11
VclQ64727 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.39□□□□□ -0.11
VclQ64727 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.39□□□□□ -0.11
VclQ64727 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.39□□□□□ -0.11
VclQ64727 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms