Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.86□□□□□ -0.51
Col7a1Q63870 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm37489-201ENSMUST00000191883 159 ntBASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm44551-201ENSMUST00000208804 171 ntBASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm18212-201ENSMUST00000211678 889 ntBASIC11.86□□□□□ -0.51
Col7a1Q63870 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.86□□□□□ -0.51
Col7a1Q63870 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col7a1Q63870 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Col7a1Q63870 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.85□□□□□ -0.51
Col7a1Q63870 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm10275-202ENSMUST00000168697 495 ntBASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm18893-201ENSMUST00000198416 943 ntBASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm10608-202ENSMUST00000213924 676 ntBASIC11.85□□□□□ -0.51
Col7a1Q63870 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm10275-201ENSMUST00000092620 635 ntBASIC11.85□□□□□ -0.51
Col7a1Q63870 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col7a1Q63870 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Col7a1Q63870 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Gm13047-201ENSMUST00000117116 815 ntBASIC11.84□□□□□ -0.51
Col7a1Q63870 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col7a1Q63870 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Gm4986-201ENSMUST00000119731 549 ntBASIC11.84□□□□□ -0.51
Col7a1Q63870 Gm14277-201ENSMUST00000121195 360 ntBASIC11.84□□□□□ -0.51
Col7a1Q63870 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.84□□□□□ -0.51
Col7a1Q63870 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Col7a1Q63870 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col7a1Q63870 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.51
Col7a1Q63870 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.83□□□□□ -0.51
Col7a1Q63870 Gm13369-201ENSMUST00000119442 987 ntBASIC11.83□□□□□ -0.51
Col7a1Q63870 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.83□□□□□ -0.51
Col7a1Q63870 Gm9550-201ENSMUST00000161130 862 ntBASIC11.83□□□□□ -0.51
Col7a1Q63870 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Col7a1Q63870 Gm38223-201ENSMUST00000194484 695 ntBASIC11.83□□□□□ -0.51
Col7a1Q63870 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col7a1Q63870 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col7a1Q63870 Celf4-206ENSMUST00000224553 1729 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms