Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.87□□□□□ -0.67
Foxc1Q61572 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Foxc1Q61572 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Foxc1Q61572 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Gm23935-201ENSMUST00000102303 57 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Gm24270-201ENSMUST00000102326 57 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Gm24245-201ENSMUST00000157318 57 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Gm26308-201ENSMUST00000157768 69 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Foxc1Q61572 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Foxc1Q61572 Grk6-207ENSMUST00000225925 2769 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Foxc1Q61572 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.86□□□□□ -0.67
Foxc1Q61572 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.85□□□□□ -0.67
Foxc1Q61572 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.85□□□□□ -0.67
Foxc1Q61572 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Mir8117-201ENSMUST00000184773 107 ntBASIC10.85□□□□□ -0.67
Foxc1Q61572 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Gm44387-201ENSMUST00000196298 145 ntBASIC10.85□□□□□ -0.67
Foxc1Q61572 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms